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3 years 6 months ago #8728 by atefeh.ghlzd
starting the simulaion was created by atefeh.ghlzd
Hello,

I previously used gromos96 force field, now I feel somehow confused about how should I start the simulation with martini force field! I can not find any tutorial related to coarse-grained simulation.

I will appreciate any help.

Atefeh

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3 years 6 months ago #8730 by vainikka
Replied by vainikka on topic starting the simulaion
You can run Martini simulations with GROMACS just as you would run any atomistic simulations - you'll need the general force field itp-file, and itp files for the coarse grained molecules your system contains. All of these can be found in the 'Downloads' section of this webpage.

We also have quite a few tutorials here on this website, maybe you missed them? I suggest starting with 'lipids with the lipidome'.

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3 years 6 months ago #8731 by atefeh.ghlzd
Replied by atefeh.ghlzd on topic starting the simulaion
Thank you for your quick response.

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