normal POPC topolgy and particle definition

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9 years 5 months ago - 9 years 5 months ago #4112 by initram
POPC topolgy and particle definition was created by initram
Hi,

I see that in POPC topology one of the atom types is D3B.
Should I use martini_v2.1.itp or martini_v2.2.itp with this topology?

Thank you
Last edit: 9 years 5 months ago by initram.

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9 years 5 months ago #4113 by Clement
Replied by Clement on topic POPC topolgy and particle definition
Just a bead name to make evident the double bond of the oleoyl chain. But the bead type is C3 (next column). For this lipid only, you can use any of the force fields you listed below.

Cheers!

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9 years 5 months ago #4114 by initram
Replied by initram on topic POPC topolgy and particle definition
Thanks

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