Does Martini have DMPC lipid?

4 years 2 months ago #8419 by xl23

Does Martini have DMPC lipid? was created by xl23

Hi,

I was checking md.chem.rug.nl/index.php/force-field-parameters/lipids but I could not find the DMPC lipid. Is it available for the current force field?

Thanks,
Luke

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4 years 2 months ago #8421 by riccardo

Replied by riccardo on topic Does Martini have DMPC lipid?

Hi,
usually, the model listed as DLPC ( md.chem.rug.nl/index.php/force-field-par...ml?dir=PC&lipid=DLPC ) is taken to represent lipids with saturated tails of length between 12 (DLPC) and 14 (DMPC), so you can use that topology to model DMPC.

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4 years 2 months ago #8422 by xl23

Replied by xl23 on topic Does Martini have DMPC lipid?

Thanks a lot!

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General Purpose Coarse-Grained Force Field