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Force Fields
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Lipids
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radial distribution function
radial distribution function
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gourav
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Topic Author
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Offline
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Fresh Boarder
12 years 6 months ago #795
by gourav
i am doing simulation with a system comprising of three lipids cholesterol,ppcs and popc.While doing analysis i am confused with calculation of radial distribution function:these are the commands used by me
##g_rdf -f topol.gro -s topol.tpr -n index.ndx -o rdf_carbon.xvg -ng 1
group selected by me as refrence is ppcs and other group as popc
Is the right way or do i have to make index file with atoms in it and select them as refrence.
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Force Fields
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Lipids
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radial distribution function
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