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normal how to convert a lipid pdb file to a CG pdb file

  • Jian
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13 years 6 months ago #419 by Jian
how to convert a lipid pdb file to a CG pdb file was created by Jian
Hi,All

how to convert a lipid pdb file to a CG pdb file? Can I use atom2cg ( md.chem.rug.nl/cgmartini/index.php/downloads/tools/107-atom2cg ) ? It seems that this is for protein & peptide ( md.chem.rug.nl/cgmartini/index.php/downloads/tools ).

Thank you!

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13 years 6 months ago #421 by xavier
Replied by xavier on topic how to convert a lipid pdb file to a CG pdb file
It is not restricted to peptides and protein ... you just need to define the mapping in the atomistic topology.

Just follow the tutorial and repeat it for your lipids.

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