unanswered Color a protein by rmsd

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9 months 6 days ago #7539 by BioSFLab
BioSFLab created the topic: Color a protein by rmsd
Hi,

We are curious if anyone tried to color a coarse grained proten by rmsd.
The script we used is residue_rmsd.tcl (it can be found here ), but it keeps giving an error:

Calculating rmsd for frame 0 ...
measure fit: no atoms selected

First, we're not sure if the script works with .gro and .xtc files? And second, for atomselect we put 'name BB', we don't know if there is something else we can select that might work.

Thanks!

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