Actin with ADP and ATP

Interested in using Martini for ADP or ATP with actin?

The attached .zip -file contains topologies for ADP, ATP as well as ADP-actin and ATP-actin systems. PDB files are provided for ADP- and ATP-actin, as well as the F-actin strand. As an added bonus, there's a short bash script which allows the user to build fibers of arbitrary lengths from one of the PDB files (2zwh.pdb).


Download the files here!