General topics 687 topics

Category

Martini Philosophy 62 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Charged beads in Martini
by bond_007
3 weeks 5 days ago

Tools 239 topics

Scripts, programs and software to use with Martini simulations.
Martinize dssp "The system can ...
by p.albanese
4 days 18 hours ago

mdp Options 95 topics

Simulation parameters for Martini simulations.
choosing mdp file for lipid si ...
by shakira
1 month 3 weeks ago

Other 146 topics

Everything that doesn't fit anywhere else.
Oleic acid backmap
by bellafrizzo
5 days 35 minutes ago

Tutorial 116 topics

Issues about the Martini tutorial
Re: Segmentation fault (core dumpe ...
by vainikka
1 month 1 week ago

Multiscaling 5 topics

Combining different levels of resolution.
Tabulated potentials
by almeida
1 month 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: membrane folding using dry MAR ...
by CharlyE
7 months 1 week ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Cyclohexane in Martini 3
by aleme
6 days 21 hours ago

Force Fields 398 topics

Category

Lipids 121 topics

Everything that has to do with the original Martini lipid forcefield.
Re: DPC single monomer
by atefeh.ghlzd
3 months 1 week ago

Proteins 116 topics

Everything that has to do with the Martini extension for proteins and peptides.
Extending the Martini coarse-g ...
by CGMD
2 months 1 week ago

Sugars 4 topics

Everything concerning the Sweet Martini sugar extension.
Re: Tutorial on Sugars
by sruthip
2 months 6 days ago

Water 32 topics

Everything about water, since (almost) every biological system contains water.
Water freezing with different ...
by almeida
1 week 6 days ago

Nucleotides 25 topics

Everything that has to do with the Martini extension to nucleotides.
Re: Martini dsRNA tutorial setup c ...
by ibrahim
6 months 3 weeks ago

Other Molecules 100 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
MARTINI Polyelectrolyte Polyme ...
by mboy@seas.upenn.edu
2 months 3 weeks ago
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