General topics 553 topics

Category

Martini Philosophy 42 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: what is the column position if ...
by peterkroon
2 months 3 weeks ago

Tools 197 topics

Scripts, programs and software to use with Martini simulations.
Re: backward.py problem determinin ...
by kristina.woods
1 day 22 hours ago

mdp Options 78 topics

Simulation parameters for Martini simulations.
Re: Domain decomposition Error
by Marius
13 hours 5 minutes ago

Other 128 topics

Everything that doesn't fit anywhere else.
Re: Solvent Accessible Surface Are ...
by z.sichaib
2 days 10 hours ago

Tutorial 95 topics

Issues about the Martini tutorial
Re: "LINCS WARNING" for EINeDyn in ...
by Pim
2 months 3 weeks ago

Multiscaling 1 topic

Combining different levels of resolution.
Re: multiscaling
by riccardo
4 months 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: make a lipid Bilayer
by bart
8 months 4 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Terminal residues
by Raksha
2 months 2 weeks ago

Force Fields 349 topics

Category

Lipids 106 topics

Everything that has to do with the original Martini lipid forcefield.
Re: PEGylated Lipid
by bart
2 months 2 weeks ago

Proteins 106 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: PEGylated protein
by fgrunewald
14 hours 10 minutes ago

Sugars 3 topics

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
6 months 2 weeks ago

Water 26 topics

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by peterkroon
6 months 2 days ago

Nucleotides 18 topics

Everything that has to do with the Martini extension to nucleotides.
Re: How to retain HETATM?
by peterkroon
1 month 4 days ago

Other Molecules 90 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Modeling Fmoc
by Tomasz
3 weeks 11 hours ago
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