General topics (533 topics)

Category

Martini Philosophy (41 topics)

Why 4-to-1 mapping? Why a limited number of particle types?
Re: create sekundär struktur and l ...
by Newguy
2 months 3 weeks ago

Tools (187 topics)

Scripts, programs and software to use with Martini simulations.
How to assess the quality of t ...
by z.sichaib
10 hours 36 minutes ago

mdp Options (76 topics)

Simulation parameters for Martini simulations.
Re: nvt step in CG simulation
by molashahi
11 hours 36 minutes ago

Other (122 topics)

Everything that doesn't fit anywhere else.
Re: Further information in: The MA ...
by Pim
18 hours 39 minutes ago

Tutorial (95 topics)

Issues about the Martini tutorial
Re: How much can I increase the -r ...
by peterkroon
1 month 1 week ago

Multiscaling (1 topics)

Combining different levels of resolution.
Re: Bonds shifting while going fro ...
by peterkroon
1 year 6 months ago

Dry Martini (7 topics)

Martini with implicit water.
Re: make a lipid Bilayer
by bart
2 months 3 weeks ago

Martini 3 open-beta (4 topics)

Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Sugar models
by bart
1 month 4 days ago

Force Fields (340 topics)

Category

Lipids (104 topics)

Everything that has to do with the original Martini lipid forcefield.
Re: inconsistent topology in examp ...
by npokhrel
4 days 5 hours ago

Proteins (103 topics)

Everything that has to do with the Martini extension for proteins and peptides.
Re: secondary structure number cod ...
by sxn
3 weeks 5 days ago

Sugars (3 topics)

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
1 week 6 days ago

Water (26 topics)

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by molashahimaryam
11 hours 45 minutes ago

Nucleotides (16 topics)

Everything that has to do with the Martini extension to nucleotides.
Re: Problem generating RNA topolog ...
by ifaustino
2 months 1 week ago

Other Molecules (88 topics)

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Possibility of partial charges ...
by Pim
11 hours 55 minutes ago
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