General topics 546 topics

Category

Martini Philosophy 42 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: what is the column position if ...
by peterkroon
1 week 5 days ago

Tools 194 topics

Scripts, programs and software to use with Martini simulations.
Re: backward with POPE and POPS
by bart
1 week 4 days ago

mdp Options 77 topics

Simulation parameters for Martini simulations.
Relative dielectric constant
by sk
3 months 1 week ago

Other 125 topics

Everything that doesn't fit anywhere else.
Re: Why too many links are not all ...
by Pim
1 week 5 days ago

Tutorial 95 topics

Issues about the Martini tutorial
Re: "LINCS WARNING" for EINeDyn in ...
by Pim
1 week 5 days ago

Multiscaling 1 topic

Combining different levels of resolution.
Re: multiscaling
by riccardo
2 months 4 days ago

Dry Martini 7 topics

Martini with implicit water.
Re: make a lipid Bilayer
by bart
6 months 3 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Terminal residues
by Raksha
5 days 16 hours ago

Force Fields 346 topics

Category

Lipids 106 topics

Everything that has to do with the original Martini lipid forcefield.
Re: PEGylated Lipid
by bart
1 week 4 days ago

Proteins 105 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: Why "HIS0", "W", "NA", "CL" ar ...
by lanselibai
5 days 15 hours ago

Sugars 3 topics

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
4 months 1 week ago

Water 26 topics

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by peterkroon
3 months 3 weeks ago

Nucleotides 17 topics

Everything that has to do with the Martini extension to nucleotides.
Re: RNA helix
by dariush
1 week 1 day ago

Other Molecules 89 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: How do I know if the coarse-gr ...
by Pim
1 week 3 days ago
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