General topics 564 topics


Martini Philosophy 44 topics

Why 4-to-1 mapping? Why a limited number of particle types?
No corresponding bead type can ...
by Hot
22 hours 46 minutes ago

Tools 200 topics

Scripts, programs and software to use with Martini simulations.
Re: backmapped structure not the s ...
by aishwarya
3 weeks 3 days ago

mdp Options 79 topics

Simulation parameters for Martini simulations.
Re: Umbrella Sampling to calculate ...
by bart
1 month 3 weeks ago

Other 130 topics

Everything that doesn't fit anywhere else.
Re: Can the simulated temperature ...
by Hot
3 weeks 5 days ago

Tutorial 97 topics

Issues about the Martini tutorial
Re: Error backmapping RNA file
by peterkroon
3 days 19 hours ago

Multiscaling 1 topic

Combining different levels of resolution.
Re: multiscaling
by riccardo
6 months 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: make a lipid Bilayer
by bart
10 months 4 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Polarizable water in MARTINI 3
by aleme
2 weeks 23 hours ago

Force Fields 352 topics


Lipids 108 topics

Everything that has to do with the original Martini lipid forcefield.
Re: Do MARTINI lipid bilayers exhi ...
by Rajat Desikan
21 hours 27 minutes ago

Proteins 106 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: PEGylated protein
by fgrunewald
1 month 4 weeks ago

Sugars 3 topics

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
8 months 2 weeks ago

Water 26 topics

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by peterkroon
8 months 1 day ago

Nucleotides 19 topics

Everything that has to do with the Martini extension to nucleotides.
Re: RNA to martini coarse grain co ...
by daniloboskovic
3 days 20 hours ago

Other Molecules 90 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Modeling Fmoc
by Tomasz
2 months 2 weeks ago
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