General topics (525 topics)

Category

Martini Philosophy (41 topics)

Why 4-to-1 mapping? Why a limited number of particle types?
Re: create sekundär struktur and l ...
by Newguy
2 weeks 4 days ago

Tools (184 topics)

Scripts, programs and software to use with Martini simulations.
Backward.py error while submit ...
by anjukris
1 week 6 days ago

mdp Options (74 topics)

Simulation parameters for Martini simulations.
Re: Wall parameters and pbc
by riccardo
1 month 2 weeks ago

Other (121 topics)

Everything that doesn't fit anywhere else.
cg_helix for multiple proteins ...
by tfischb
4 days 3 hours ago

Tutorial (93 topics)

Issues about the Martini tutorial
Re: Mapping DPC with backward.py
by almeida
4 months 4 days ago

Multiscaling (1 topics)

Combining different levels of resolution.
Re: Bonds shifting while going fro ...
by peterkroon
1 year 4 months ago

Dry Martini (7 topics)

Martini with implicit water.
Re: make a lipid Bilayer
by bart
3 weeks 4 days ago

Martini 3 open-beta (4 topics)

Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Sugar models
by P_Banerjee
3 hours 23 minutes ago

Force Fields (332 topics)

Category

Lipids (101 topics)

Everything that has to do with the original Martini lipid forcefield.
Re: Bond and angle for an ionizabl ...
by helgi
3 days 3 hours ago

Proteins (102 topics)

Everything that has to do with the Martini extension for proteins and peptides.
Re: martinze adds one more atom to ...
by tfischb
1 month 1 week ago

Sugars (2 topics)

Everything concerning the Sweet Martini sugar extension.
Re: parametes for guluronic acid r ...
by Clement
4 years 1 month ago

Water (26 topics)

Everything about water, since (almost) every biological system contains water.
Re: Convert atomistic water to MAR ...
by zidarko
1 month 1 week ago

Nucleotides (16 topics)

Everything that has to do with the Martini extension to nucleotides.
Re: Problem generating RNA topolog ...
by ifaustino
5 days 5 hours ago

Other Molecules (85 topics)

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Platinum bead
by riccardo
1 month 3 weeks ago
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