Legacy Material

Note: The material offered in this page is LEGACY material. This means that it either pertains to older iterations of the Martini force field and/or that it is no longer actively supported. However, this does not mean that there aren’t cool things to be learned here! Have a look! If you are looking for the current iterations of the Martini force field lectures or hands-on tutorials, click here to go back!

Martini 3 Legacy Tutorials

These hands-on tutorials, are deprecated versions of the Martini 3 tutorials.

Martini 3 Open Beta Legacy Tutorials

These hands-on tutorials, are based on the Martini 3 open-beta version (v.3.0.b.3.2).

Martini 2 Legacy Tutorials

These hands-on tutorials, are based on the Martini 2 family of force fields.

MARTINI WORKSHOP 2017

Groningen, The Netherlands

Monday, August 21

  • Introduction to the Martini model, Siewert Jan Marrink slides

  • Lipid biophysics with the Martini model, Helgi Ingólfsson slides

Tuesday, August 22

  • Martini model for proteins, Alex de Vries slides

  • Peptide aggregation, Pim Frederix slides

  • Photosystem II, Floris van Eerden slides

Wednesday, August 23

  • TOOLS: martinize, martinate, insane, backward, daft, Tsjerk Wassenaar slides

  • Advanced parameterization of Martini, Manuel Nuno Melo slides

  • Multiscaling with Martini, Manuel Nuno Melo slides

Thursday, August 24

  • The Martini model for DNA and RNA, Ignacio Faustino Plo slides

  • Blends for organic photovoltaics, Riccardo Alessandri slides

  • The future of Martini, Paulo Telles de Souza slides


MARTINI WORKSHOP 2015

Groningen, The Netherlands

Monday, August 24

  • Introduction to coarse-graining, Alex de Vries slides

  • Introduction to the Martini model, Siewert Jan Marrink slides

Tuesday, August 25

  • Lipid biophysics with the Martini model, Helgi Ingólfsson slides

  • Martini model for proteins, Alex de Vries slides

Wednesday, August 26

  • TOOLS: martinize, martinate, insane, backward, daft, Tsjerk Wassenaar slides

  • Martini model for saccharides (includes also other polymers and dna), Siewert Jan Marrink slides

Thursday, August 27

  • Advanced parameterization of Martini, Manuel Nuno Melo slides

  • Multiscaling with Martini, Manuel Nuno Melo slides