unanswered martini3 Cholesterol in bilayer

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4 months 3 weeks ago #9719 by Najafian
martini3 Cholesterol in bilayer was created by Najafian
Hi
I have created a lipid membrane with Martini 3 and incorporated cholesterol. However, during the equilibration phase of the simulation, some cholesterol molecules become oriented horizontally between the lipid bilayers. I would like to know if this is a common occurrence or if I have made a mistake. I would appreciate any guidance or assistance from anyone who can help me.

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