Tutorial 135 topics

Issues about the Martini tutorial

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Question about the charge and mass of beads. Topic started 3 years 1 month ago, by 若水无风 Last Post 3 years 4 weeks ago by 若水无风	Replies:7 Views:2254	Last Post by 若水无风 3 years 4 weeks ago
"Parametrizing a small molecule" tutorial missing spc162.gro Topic started 3 years 1 month ago, by jlillard Last Post 3 years 1 month ago by riccardo	Replies:1 Views:1716	Last Post by riccardo 3 years 1 month ago
dna-tutorial-martinize-dna.py error Topic started 3 years 7 months ago, by bayıl Last Post 3 years 7 months ago by peterkroon	Replies:2 Views:2001	Last Post by peterkroon 3 years 7 months ago
lipids with the lipidome tutorial Topic started 3 years 8 months ago, by atefeh.ghlzd Last Post 3 years 8 months ago by vainikka	Replies:1 Views:2131	Last Post by vainikka 3 years 8 months ago
starting the simulaion Topic started 3 years 10 months ago, by atefeh.ghlzd Last Post 3 years 10 months ago by atefeh.ghlzd	Replies:2 Views:2330	Last Post by atefeh.ghlzd 3 years 10 months ago
Protein-ligand Topic started 4 years 5 months ago, by imankatouzian Last Post 3 years 10 months ago by riccardo	Replies:6 Views:2625	Last Post by riccardo 3 years 10 months ago
Visualization using VMD (Self-assembly of functionalized alkanes on a graphite) Topic started 3 years 11 months ago, by Daisuke Last Post 3 years 11 months ago by Daisuke	Replies:1 Views:3192	Last Post by Daisuke 3 years 11 months ago
Self-assembly of functionalized alkanes on a graphite surface Topic started 3 years 11 months ago, by Daisuke Last Post 3 years 11 months ago by Daisuke	Replies:4 Views:2216	Last Post by Daisuke 3 years 11 months ago
Equilibration not progressing at all Topic started 4 years 2 weeks ago, by darrenphua Last Post 4 years 2 weeks ago by darrenphua	Replies:0 Views:1759	Last Post by darrenphua 4 years 2 weeks ago
MARTINI for cyclodextrins Topic started 4 years 2 weeks ago, by darrenphua Last Post 4 years 2 weeks ago by darrenphua	Replies:2 Views:1566	Last Post by darrenphua 4 years 2 weeks ago
polyelectrolyte gmx distance failing Topic started 4 years 2 months ago, by mboy@seas.upenn.edu Last Post 4 years 2 months ago by mboy@seas.upenn.edu	Replies:2 Views:1814	Last Post by mboy@seas.upenn.edu 4 years 2 months ago
martinize-dna.py Topic started 4 years 3 months ago, by Fondyffendof Last Post 4 years 3 months ago by Fondyffendof	Replies:3 Views:1961	Last Post by Fondyffendof 4 years 3 months ago
backmap problem: New molecule (ligand) (Updated) Topic started 7 years 1 month ago, by albumns Last Post 4 years 3 months ago by bhupendra123	Replies:8 Views:5669	Last Post by bhupendra123 4 years 3 months ago
pbc box Topic started 4 years 5 months ago, by imankatouzian Last Post 4 years 4 months ago by riccardo	Replies:3 Views:2121	Last Post by riccardo 4 years 4 months ago
solvate- water out of box? Topic started 4 years 5 months ago, by imankatouzian Last Post 4 years 5 months ago by imankatouzian	Replies:0 Views:1531	Last Post by imankatouzian 4 years 5 months ago
PEG Tutorial - Error Calculating Bond Distances Topic started 4 years 6 months ago, by TravisM Last Post 4 years 5 months ago by riccardo	Replies:4 Views:2274	Last Post by riccardo 4 years 5 months ago
Why I got water in the centre with DPPC on the two sides? Topic started 5 years 6 months ago, by lanselibai Last Post 4 years 6 months ago by riccardo	Replies:5 Views:2192	Last Post by riccardo 4 years 6 months ago
./do-order-gmx5.py analysis Topic started 4 years 9 months ago, by cm Last Post 4 years 9 months ago by cm	Replies:0 Views:1869	Last Post by cm 4 years 9 months ago
bitcoin coin mixer Topic started 7 years 7 months ago, by roshanak Last Post 4 years 9 months ago by riccardo	Replies:7 Views:11k	Last Post by riccardo 4 years 9 months ago
how to place protein at a certain distance away from the membrane Topic started 5 years 1 day ago, by cm Last Post 4 years 10 months ago by riccardo	Replies:4 Views:1821	Last Post by riccardo 4 years 10 months ago

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General Purpose Coarse-Grained Force Field

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Tutorial 135 topics