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unanswered Complex bilayer tutorial

  • tanvipar123
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1 year 9 months ago #9424 by tanvipar123
Complex bilayer tutorial was created by tanvipar123
I am following the complex bilayers tutorial. I am trying to create an index file for lipids and solvent as per the readme file in the zip folder. But after I pass the command
gmx grompp -p dppc-dipc-chol.top -c relax-1.gro -f relax-10.mdp -o relax-10.mdp.
Gromacs throws an error stating Group Lipids referenced in the .mdp file was not found in the index file.
Group names must match either [moleculetype] names or custom index group
names, in which case you must supply an index file to the '-n' option
of grompp.
Although my index file does contain the name [Lipids]

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  1. Force Fields
  3. Lipids
  5. Complex bilayer tutorial
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