unanswered How to calculate order parameter and area per lipid in lipid mixture

  • nami
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7 months 3 weeks ago #9705 by nami
I am working on a project using Martini 3 force field. I have simulated a membrane containing DOPC, DOPE, DOPS, POSM and CHOL, and I want to calculate the lipid tail order parameter for the inner and outer layers as well as area per lipid. However, I have encountered some difficulties in this process.
Could any one please share with me the methods and scripts that used to calculate these parameters in coarse-gained simulation?

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