mdp Options 107 topics

Simulation parameters for Martini simulations.

Subject	Replies / Views	Last Post
lipid bilayer minimization Topic started 10 years 7 months ago, by ipsita Last Post 10 years 6 months ago by Clement	Replies:8 Views:5396	Last Post by Clement 10 years 6 months ago
How important is nstlist=1, instead of nstlist=10? Topic started 10 years 8 months ago, by Rajat Desikan Last Post 10 years 8 months ago by siewert	Replies:6 Views:6602	Last Post by siewert 10 years 8 months ago
Protein in water using Elnedyn Topic started 11 years 2 months ago, by bt12d026 Last Post 10 years 9 months ago by Rajat Desikan 1 2 3	Replies:51 Views:27.6k	Last Post by Rajat Desikan 10 years 9 months ago
Self-Assembly: different pressure control Topic started 10 years 10 months ago, by mferraro Last Post 10 years 10 months ago by mferraro	Replies:2 Views:3615	Last Post by mferraro 10 years 10 months ago
md wall parameters Topic started 11 years 1 month ago, by nanogod Last Post 11 years 1 month ago by xavier	Replies:1 Views:3601	Last Post by xavier 11 years 1 month ago
Domain decomposition error Topic started 11 years 2 months ago, by bt12d026 Last Post 11 years 2 months ago by bt12d026	Replies:2 Views:4000	Last Post by bt12d026 11 years 2 months ago
Simulated annealing error Topic started 11 years 3 months ago, by bt12d026 Last Post 11 years 3 months ago by djurre	Replies:1 Views:4019	Last Post by djurre 11 years 3 months ago
sample.mdp file for making input.tpr file in using g_membed Topic started 11 years 5 months ago, by thu nguyen Last Post 11 years 4 months ago by xavier	Replies:2 Views:4679	Last Post by xavier 11 years 4 months ago
Note while doing energy minimization Topic started 11 years 5 months ago, by anuvc84 Last Post 11 years 5 months ago by djurre	Replies:1 Views:4282	Last Post by djurre 11 years 5 months ago
MARTINI compatibility with Verlet cut-off scheme Topic started 11 years 6 months ago, by kmcallenberg Last Post 11 years 6 months ago by djurre	Replies:3 Views:5841	Last Post by djurre 11 years 6 months ago
NVT MD works but not NPT MD (domain decomposition error) Topic started 11 years 7 months ago, by payel Last Post 11 years 7 months ago by djurre	Replies:5 Views:6906	Last Post by djurre 11 years 7 months ago
An error with rdd Topic started 11 years 7 months ago, by dujiangfeng Last Post 11 years 7 months ago by xavier	Replies:1 Views:4063	Last Post by xavier 11 years 7 months ago
mdp update from gromacs 3 to gromacs 4 Topic started 13 years 9 months ago, by Jian Last Post 11 years 8 months ago by richor	Replies:4 Views:5064	Last Post by richor 11 years 8 months ago
How sensitive of a simulaiton code it is? Topic started 11 years 10 months ago, by dujiangfeng Last Post 11 years 10 months ago by xavier	Replies:3 Views:4604	Last Post by xavier 11 years 10 months ago
Reverse Transformation Topic started 11 years 10 months ago, by nivedita Last Post 11 years 10 months ago by floris	Replies:3 Views:4062	Last Post by floris 11 years 10 months ago
md simulation code Topic started 11 years 11 months ago, by dujiangfeng Last Post 11 years 10 months ago by dujiangfeng 1 2	Replies:23 Views:13.6k	Last Post by dujiangfeng 11 years 10 months ago
Segmentation Fault during PR run Topic started 11 years 11 months ago, by think_beyond Last Post 11 years 11 months ago by djurre	Replies:3 Views:4437	Last Post by djurre 11 years 11 months ago
Reverse Transformation mdp file Topic started 12 years 2 months ago, by anna_duncan Last Post 12 years 3 weeks ago by jantunes	Replies:1 Views:3587	Last Post by jantunes 12 years 3 weeks ago
Ask about thermostat and pressure coupling Topic started 12 years 2 months ago, by yongle Last Post 12 years 2 months ago by yongle	Replies:2 Views:4538	Last Post by yongle 12 years 2 months ago
PME parameters Topic started 12 years 4 months ago, by joshua_roc Last Post 12 years 2 months ago by xavier	Replies:4 Views:6071	Last Post by xavier 12 years 2 months ago

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General Purpose Coarse-Grained Force Field

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mdp Options 107 topics