normal Martinize trajectory?

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1 year 6 months ago #9543 by mason
Martinize trajectory? was created by mason
Hi folks,

I want to compare measurements between my CG simulations and some AA reference data, so I'm looking at martinizing my AA trajectories. I have a script that does this one frame at a time using .gro files, but that's pretty slow and pretty redundant. Is there a better way maybe I'm not thinking of?

Best,

Mason

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1 year 6 months ago #9544 by riccardo
Replied by riccardo on topic Martinize trajectory?
One way to do this is to use "gmx traj". See, e.g., step 3 of this tutorial: github.com/ricalessandri/Martini3-small-...atomistic-simulation .

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