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Difference between solvate in MARTINI and GROMACS? Topic started 3 years 9 months ago, by darrenphua Last Post 3 years 9 months ago by darrenphua	Replies:3 Views:2483	Last Post by darrenphua 3 years 9 months ago
How to calculate the binding energy in the Martini coarse-grained MD simulation? Topic started 3 years 10 months ago, by Tim Last Post 3 years 10 months ago by riccardo	Replies:1 Views:1651	Last Post by riccardo 3 years 10 months ago
parameter for new molecule Topic started 3 years 10 months ago, by a786pati Last Post 3 years 10 months ago by riccardo	Replies:1 Views:1508	Last Post by riccardo 3 years 10 months ago
Do we need to do Equilibriation step even for the MD simulation of 100ps? Topic started 3 years 10 months ago, by sagar Last Post 3 years 10 months ago by vainikka	Replies:3 Views:1407	Last Post by vainikka 3 years 10 months ago
martinize-dna.py error Topic started 3 years 10 months ago, by jfliu21 Last Post 3 years 10 months ago by vainikka	Replies:1 Views:1614	Last Post by vainikka 3 years 10 months ago
Background permittivity Topic started 3 years 11 months ago, by aleme Last Post 3 years 11 months ago by aleme	Replies:0 Views:1498	Last Post by aleme 3 years 11 months ago
Side chain orientation/dynamics in time Topic started 4 years 1 week ago, by z.sichaib Last Post 4 years 1 week ago by z.sichaib	Replies:0 Views:1349	Last Post by z.sichaib 4 years 1 week ago
Grand Canonical + MD with Martini Topic started 4 years 1 month ago, by mohsen2002 Last Post 4 years 1 month ago by mohsen2002	Replies:0 Views:1468	Last Post by mohsen2002 4 years 1 month ago
Electron density for Martini Membranes Topic started 4 years 5 months ago, by ibrahim Last Post 4 years 2 months ago by shakira	Replies:8 Views:4343	Last Post by shakira 4 years 2 months ago
Optimal lipid composition of Outer Mitochondrial Membrane (OMM) for MD runs Topic started 4 years 9 months ago, by z.sichaib Last Post 4 years 8 months ago by xavier	Replies:1 Views:1821	Last Post by xavier 4 years 8 months ago
Solvent Accessible Surface Area on Martini Trajectories Topic started 4 years 11 months ago, by z.sichaib Last Post 4 years 9 months ago by z.sichaib	Replies:5 Views:3909	Last Post by z.sichaib 4 years 9 months ago
Can the simulated temperature be set to 560 K? Topic started 4 years 10 months ago, by Hot Last Post 4 years 10 months ago by Hot	Replies:4 Views:1697	Last Post by Hot 4 years 10 months ago
How to build and equilibrate a custom sized water box Topic started 4 years 11 months ago, by Niels Johan Christensen Last Post 4 years 11 months ago by Niels Johan Christensen	Replies:2 Views:2770	Last Post by Niels Johan Christensen 4 years 11 months ago
Peptide aggregation Topic started 5 years 1 month ago, by pela3247 Last Post 5 years 1 month ago by Pim	Replies:1 Views:1605	Last Post by Pim 5 years 1 month ago
Hot solvent-cold solute problem for DOPC/cholesterol simulation Topic started 5 years 1 month ago, by mandar Last Post 5 years 1 month ago by peterkroon	Replies:1 Views:3462	Last Post by peterkroon 5 years 1 month ago
Why too many links are not allowed for a post? Topic started 5 years 2 months ago, by lanselibai Last Post 5 years 2 months ago by Pim	Replies:1 Views:5492	Last Post by Pim 5 years 2 months ago
Problem with mapping Topic started 5 years 4 months ago, by sot Last Post 5 years 4 months ago by sot	Replies:4 Views:1822	Last Post by sot 5 years 4 months ago
What is the best way to attach ligand on the surface of gold nanoparicles? Topic started 5 years 5 months ago, by Imamul Last Post 5 years 5 months ago by Imamul	Replies:4 Views:2795	Last Post by Imamul 5 years 5 months ago
Further information in: The MARTINI Force Field Topic started 10 years 5 months ago, by panzu Last Post 5 years 5 months ago by Pim	Replies:16 Views:6984	Last Post by Pim 5 years 5 months ago
elnedyn modifications Topic started 5 years 7 months ago, by bakerj Last Post 5 years 7 months ago by bart	Replies:1 Views:5811	Last Post by bart 5 years 7 months ago

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General Purpose Coarse-Grained Force Field

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