Martini Philosophy 82 topics

Why 4-to-1 mapping? Why a limited number of particle types?

Subject	Replies / Views	Last Post
Guess force constants for angles and dihedrals from AA simulations? Topic started 4 years 11 months ago, by rajgnu Last Post 4 years 11 months ago by bart	Replies:1 Views:79.1k	Last Post by bart 4 years 11 months ago
what is the column position if "ASP" is changed to "ASP0" in the itp file? Topic started 5 years 2 months ago, by lanselibai Last Post 5 years 2 months ago by peterkroon	Replies:4 Views:2065	Last Post by peterkroon 5 years 2 months ago
create sekundär struktur and limitation when not Topic started 5 years 8 months ago, by Newguy Last Post 5 years 8 months ago by Newguy	Replies:3 Views:2361	Last Post by Newguy 5 years 8 months ago
On Martini 3.0 release Topic started 5 years 9 months ago, by yogi@martini Last Post 5 years 9 months ago by yogi@martini	Replies:0 Views:4424	Last Post by yogi@martini 5 years 9 months ago
Matching bilayer thickness between AA and CG Topic started 6 years 1 month ago, by yogi@martini Last Post 6 years 1 month ago by yogi@martini	Replies:0 Views:2497	Last Post by yogi@martini 6 years 1 month ago
Reason for different number of bead assignment for same number of carbons Topic started 6 years 8 months ago, by nandhini1992 Last Post 6 years 7 months ago by jbarnoud	Replies:1 Views:3138	Last Post by jbarnoud 6 years 7 months ago
Box was shifted at least 10 times Topic started 6 years 9 months ago, by Imamul Last Post 6 years 9 months ago by Imamul	Replies:2 Views:5502	Last Post by Imamul 6 years 9 months ago
Coarse-graining of Gold nanoparticle (Au NP) Topic started 6 years 11 months ago, by Imamul Last Post 6 years 11 months ago by riccardo	Replies:3 Views:8249	Last Post by riccardo 6 years 11 months ago
ssd file Topic started 6 years 11 months ago, by roshanak Last Post 6 years 11 months ago by roshanak	Replies:0 Views:3189	Last Post by roshanak 6 years 11 months ago
How particle C1 and C2 are different in their interaction. Topic started 7 years 4 weeks ago, by yogi@martini Last Post 7 years 4 weeks ago by riccardo	Replies:1 Views:4398	Last Post by riccardo 7 years 4 weeks ago
How to set desired mass to a given bead? Topic started 7 years 1 month ago, by yogi@martini Last Post 7 years 1 month ago by yogi@martini	Replies:4 Views:4686	Last Post by yogi@martini 7 years 1 month ago
Difficulty adding the martini force field Topic started 7 years 4 months ago, by jcopp Last Post 7 years 3 months ago by jbarnoud	Replies:1 Views:4368	Last Post by jbarnoud 7 years 3 months ago
Difficulty adding the martini force field Topic started 7 years 4 months ago, by jcopp Last Post 7 years 4 months ago by peterkroon	Replies:1 Views:3915	Last Post by peterkroon 7 years 4 months ago
force field parameters Topic started 7 years 7 months ago, by yzhou Last Post 7 years 6 months ago by peterkroon	Replies:1 Views:5468	Last Post by peterkroon 7 years 6 months ago
MARTINI vs. Force Matching Topic started 7 years 8 months ago, by dariush Last Post 7 years 8 months ago by xavier	Replies:2 Views:5023	Last Post by xavier 7 years 8 months ago
Polymer Radius of gyration Topic started 7 years 9 months ago, by ywang52 Last Post 7 years 9 months ago by ywang52	Replies:1 Views:3843	Last Post by ywang52 7 years 9 months ago
Bead types Topic started 7 years 11 months ago, by P_Banerjee Last Post 7 years 11 months ago by peterkroon	Replies:1 Views:11.5k	Last Post by peterkroon 7 years 11 months ago
Domain http://cgmartini.nl/ is not working Topic started 7 years 11 months ago, by flaviyan Last Post 7 years 11 months ago by jaakko	Replies:1 Views:3295	Last Post by jaakko 7 years 11 months ago
scaling factor about the free energy calculations Topic started 8 years 5 months ago, by xiaoyan_zheng Last Post 8 years 4 months ago by peterkroon	Replies:3 Views:6684	Last Post by peterkroon 8 years 4 months ago
Use of solvent ions in martini Topic started 8 years 11 months ago, by rcorey Last Post 8 years 4 months ago by rcorey	Replies:2 Views:11.2k	Last Post by rcorey 8 years 4 months ago

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General Purpose Coarse-Grained Force Field

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Martini Philosophy 82 topics