Proteins 143 topics

Everything that has to do with the Martini extension for proteins and peptides.

Subject	Replies / Views	Last Post
Are proteins flexible around kinked TMs? Topic started 7 years 5 months ago, by michaelvlevine Last Post 7 years 5 months ago by mnmelo	Replies:2 Views:3521	Last Post by mnmelo 7 years 5 months ago
Martinize and uncharged lysine side chain Topic started 7 years 10 months ago, by danijoo Last Post 7 years 6 months ago by jbarnoud	Replies:1 Views:3412	Last Post by jbarnoud 7 years 6 months ago
Mismatch between coordinate file and topology Topic started 7 years 8 months ago, by sri27 Last Post 7 years 7 months ago by peterkroon	Replies:1 Views:3405	Last Post by peterkroon 7 years 7 months ago
How to build CG structure if I have X AA Topic started 7 years 10 months ago, by elkafirmanda Last Post 7 years 9 months ago by peterkroon	Replies:1 Views:3155	Last Post by peterkroon 7 years 9 months ago
ion channel Topic started 7 years 11 months ago, by ion channel Last Post 7 years 9 months ago by peterkroon	Replies:5 Views:3789	Last Post by peterkroon 7 years 9 months ago
Proper dihedrals Topic started 7 years 9 months ago, by nilusha Last Post 7 years 9 months ago by peterkroon	Replies:6 Views:6037	Last Post by peterkroon 7 years 9 months ago
self-assembling peptides Topic started 8 years 6 months ago, by saracino Last Post 7 years 9 months ago by beenish	Replies:2 Views:3816	Last Post by beenish 7 years 9 months ago
Non-standard residues (PTR) in Martini FF Topic started 8 years 1 month ago, by Tam Nguyen Last Post 8 years 2 weeks ago by siewert	Replies:3 Views:4893	Last Post by siewert 8 years 2 weeks ago
Dihedral restraints Topic started 8 years 2 months ago, by beenish Last Post 8 years 3 weeks ago by beenish	Replies:2 Views:3487	Last Post by beenish 8 years 3 weeks ago
Side chain fix (scFix) Topic started 8 years 2 months ago, by LJefferys Last Post 8 years 2 months ago by flaviyan	Replies:5 Views:4598	Last Post by flaviyan 8 years 2 months ago
Number of atoms of HIH didn't match Topic started 8 years 2 months ago, by flyseed Last Post 8 years 2 months ago by flyseed	Replies:0 Views:3117	Last Post by flyseed 8 years 2 months ago
Parametrization using 2.2P force field Topic started 8 years 4 months ago, by James Starlight Last Post 8 years 3 months ago by peterkroon	Replies:1 Views:4018	Last Post by peterkroon 8 years 3 months ago
Problem : g_membed error Topic started 8 years 5 months ago, by Luca Last Post 8 years 5 months ago by Luca	Replies:0 Views:3158	Last Post by Luca 8 years 5 months ago
Assigning specific charges to fixed CG model Topic started 8 years 7 months ago, by sourav Last Post 8 years 7 months ago by sourav	Replies:0 Views:3024	Last Post by sourav 8 years 7 months ago
multidomain protein Topic started 8 years 10 months ago, by gbalogh Last Post 8 years 8 months ago by helgi	Replies:1 Views:3388	Last Post by helgi 8 years 8 months ago
query regarding coarse-grained MD of modified prot Topic started 9 years 1 month ago, by sangita Last Post 8 years 8 months ago by helgi	Replies:1 Views:3447	Last Post by helgi 8 years 8 months ago
elastic network between two subunits Topic started 10 years 1 month ago, by ruoxu Last Post 8 years 9 months ago by Luca	Replies:2 Views:4517	Last Post by Luca 8 years 9 months ago
Regarding temperature Topic started 9 years 5 days ago, by Navarro Last Post 8 years 11 months ago by mnmelo	Replies:13 Views:7043	Last Post by mnmelo 8 years 11 months ago
Elastic network to just one domain of the protein Topic started 8 years 11 months ago, by Prunotto Last Post 8 years 11 months ago by mnmelo	Replies:5 Views:4664	Last Post by mnmelo 8 years 11 months ago
Mutating residues in martini forcefield Topic started 9 years 2 months ago, by rcorey Last Post 9 years 1 month ago by rcorey	Replies:4 Views:4461	Last Post by rcorey 9 years 1 month ago

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General Purpose Coarse-Grained Force Field

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Proteins 143 topics